Connect to Catmaid Server

Retrieve Annotations

Get Neuron IDs in a List for Indexing

Import Connectome Options

Adjacency Matrix Between Source and Target Neurons

Adjacency Matrix From Neurons' Connectors

pymaid.adjacency_from_connectors is meant to generate an adjacency matrix from data with repeated skeleton ids. Our IDs do not repeat so this was skipped.

Edges Between Sets of Neurons

This is just the same as the original connectome imported earlier, as shown below:

Partners connected by synapses, gap junctions, or attachments